Predicting Candidate Transcription Factors in Anonymous Complex

Remodeling diagram for SKA2 (chr17:54586809-54587979)

(click here to view this track in the UCSC Genome Browser)



Start: chr17:54586809
End: chr17:54587979

Shaded regions = areas of significant enrichment. This diagram is annotated using the best match at each enriched region. A list of other candidate transcription factors for each region is provided below, along with each factor's score for that region.

Regions (listed from left to right):

Undiff:

Region 1:
Brca1
Zic3
Sp1
Zic3
Ebf1

Region 2:
Smad3
Ctcf
Smad3
E2f3
Zic3

Region 3:
Sp1
Klf7
Egr1
Klf7
Hmbox1

Region 4:
Nfe2l2
Gata6
Gata5
Gata1
Foxa2


688523
586683
309941
239918
227062


30055657
8933333
1109262
780982
646458


18252773
2551542
465040
389964
328771


1709069
715479
443595
306149
92193

Diff:

Region 1:
Brca1
Zic3
Zic3
Sp1
Plagl1

Region 2:
Gata6
Nfe2l2
Foxa2
Gata1
Creb1


667098
471597
192854
176028
160953


1391159
1212112
358395
85775
78304